nixpkgs/pkgs/by-name/tr/trimal/package.nix
aleksana 571c71e6f7 treewide: migrate packages to pkgs/by-name, take 1
We are migrating packages that meet below requirements:

1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration

The tool is here: https://github.com/Aleksanaa/by-name-migrate.
2024-11-09 20:04:51 +08:00

32 lines
781 B
Nix

{ lib, stdenv, fetchFromGitHub }:
stdenv.mkDerivation rec {
pname = "trimal";
version = "1.5.0";
src = fetchFromGitHub {
repo = pname;
owner = "scapella";
rev = "v${version}";
sha256 = "sha256-6GXirih7nY0eD2XS8aplLcYf53EeLuae+ewdUgBiKQQ=";
};
postUnpack = ''
sourceRoot=''${sourceRoot}/source
echo Source root reset to ''${sourceRoot}
'';
installPhase = ''
mkdir -p $out/bin
cp -a trimal readal statal $out/bin
'';
meta = with lib; {
description = "Tool for the automated removal of spurious sequences or poorly aligned regions from a multiple sequence alignment";
license = licenses.gpl3;
platforms = platforms.linux;
homepage = "http://trimal.cgenomics.org";
maintainers = [ maintainers.bzizou ];
};
}