ff1a94e523
The nixpkgs-unstable channel's programs.sqlite was used to identify packages producing exactly one binary, and these automatically added to their package definitions wherever possible.
52 lines
1.2 KiB
Nix
52 lines
1.2 KiB
Nix
{ lib
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, stdenv
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, fetchFromGitHub
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, cmake
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, xxd
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, perl
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, installShellFiles
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, enableAvx2 ? stdenv.hostPlatform.avx2Support
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, enableSse4_1 ? stdenv.hostPlatform.sse4_1Support
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, enableMpi ? false
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, mpi
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, openmp
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, zlib
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, bzip2
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}:
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stdenv.mkDerivation rec {
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pname = "mmseqs2";
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version = "15-6f452";
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src = fetchFromGitHub {
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owner = "soedinglab";
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repo = pname;
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rev = version;
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sha256 = "sha256-L+zOWrGkCLz/wqpBuji8H4/93sDFpcfnDOE8FHq1j84=";
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};
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nativeBuildInputs = [ cmake xxd perl installShellFiles ];
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cmakeFlags =
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lib.optional enableAvx2 "-DHAVE_AVX2=1"
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++ lib.optional enableSse4_1 "-DHAVE_SSE4_1=1"
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++ lib.optional enableMpi "-DHAVE_MPI=1";
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buildInputs =
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lib.optionals stdenv.cc.isClang [ openmp zlib bzip2 ]
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++ lib.optional enableMpi mpi;
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postInstall = ''
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installShellCompletion --bash --cmd mmseqs $out/util/bash-completion.sh
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rm -r $out/util/
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'';
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meta = with lib; {
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description = "Ultra fast and sensitive sequence search and clustering suite";
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mainProgram = "mmseqs";
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homepage = "https://mmseqs.com/";
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license = licenses.gpl3;
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maintainers = with maintainers; [ natsukium ];
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platforms = platforms.unix;
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};
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}
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