treewide: replace all pytest-cov patching outside of pythonPackages with pytest-cov-stub

pkgs/applications/audio/gpodder/default.nix

@@ -47,7 +47,7 @@ python311Packages.buildPythonApplication rec {
     minimock
     pytest
     pytest-httpserver
-    pytest-cov
+    pytest-cov-stub
   ];
 
   doCheck = true;

pkgs/applications/networking/protonvpn-gui/default.nix

@@ -19,6 +19,7 @@
 , proton-vpn-session
 , pycairo
 , pygobject3
+, pytest-cov-stub
 , pytestCheckHook
 , withIndicator ? true
 , libappindicator-gtk3
@@ -69,11 +70,6 @@ buildPythonApplication rec {
     pygobject3
   ];
 
-  postPatch = ''
-    substituteInPlace setup.cfg \
-      --replace-fail "--cov=proton --cov-report=html --cov-report=term" ""
-  '';
-
   postInstall = ''
     mkdir -p $out/share/{applications,pixmaps}
     install -Dm 644 ${src}/rpmbuild/SOURCES/protonvpn-app.desktop $out/share/applications
@@ -81,6 +77,7 @@ buildPythonApplication rec {
   '';
 
   nativeCheckInputs = [
+    pytest-cov-stub
     pytestCheckHook
   ];
 

pkgs/applications/office/paperless-ngx/default.nix

@@ -219,6 +219,7 @@ python.pkgs.buildPythonApplication rec {
     daphne
     factory-boy
     imagehash
+    pytest-cov-stub
     pytest-django
     pytest-env
     pytest-httpx
@@ -240,10 +241,6 @@ python.pkgs.buildPythonApplication rec {
     export PATH="${path}:$PATH"
     export HOME=$(mktemp -d)
     export XDG_DATA_DIRS="${liberation_ttf}/share:$XDG_DATA_DIRS"
-
-    # Disable unneeded code coverage test
-    substituteInPlace src/setup.cfg \
-      --replace-fail "--cov --cov-report=html --cov-report=xml" ""
   '';
 
   disabledTests = [

pkgs/applications/version-management/git-archive-all/default.nix

@@ -3,6 +3,7 @@
 , fetchFromGitHub
 , git
 , pytestCheckHook
+, pytest-cov-stub
 , pytest-mock
 }:
 
@@ -28,7 +29,6 @@ buildPythonApplication rec {
       --replace pytest==5.2.2 pytest \
       --replace pytest-cov==2.8.1 "" \
       --replace pytest-mock==1.11.2 pytest-mock \
-      --replace "--cov=git_archive_all --cov-report=term --cov-branch" "" \
       --replace "filterwarnings = error" ""
     substituteInPlace test_git_archive_all.py \
       --replace "import pycodestyle" ""
@@ -40,6 +40,7 @@ buildPythonApplication rec {
 
   checkInputs = [
     pytestCheckHook
+    pytest-cov-stub
     pytest-mock
   ];
 

pkgs/by-name/au/autosuspend/package.nix

@@ -17,11 +17,6 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-AJ0ZWRxqhBJEics6XnIVWyf7pJI8MphQU4LRqSYYNSQ=";
   };
 
-  postPatch = ''
-    substituteInPlace setup.cfg \
-      --replace-fail '--cov-config=setup.cfg' ""
-  '';
-
   dependencies = with python3.pkgs; [
     dbus-python
     icalendar
@@ -40,6 +35,7 @@ python3.pkgs.buildPythonApplication rec {
   nativeCheckInputs = with python3.pkgs; [
     dbus
     freezegun
+    pytest-cov-stub
     pytest-datadir
     pytest-httpserver
     pytest-mock

pkgs/by-name/cm/cmake-lint/package.nix

@@ -18,18 +18,13 @@ python3Packages.buildPythonApplication rec {
     hash = "sha256-/OuWwerBlJynEibaYo+jkLpHt4x9GZrqMRJNxgrDBlM=";
   };
 
-  postPatch = ''
-    # We don't need to test coverage, so remove these checks
-    substituteInPlace setup.cfg \
-      --replace-fail "addopts = --cov-fail-under=84 --cov=./cmakelint" ""
-  '';
-
   build-system = [ python3Packages.setuptools ];
 
   pythonImportsCheck = [ "cmakelint" ];
 
   nativeCheckInputs = [
     python3Packages.pytestCheckHook
+    python3Packages.pytest-cov-stub
   ];
 
   passthru.tests = {

pkgs/by-name/de/dep-scan/package.nix

@@ -16,11 +16,6 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-5iMhl3Wcxwgq4Wr0TUcAuRnb2+y8DHBugnnkpcZfSAM=";
   };
 
-  postPatch = ''
-    substituteInPlace pytest.ini \
-      --replace-fail " --cov-append --cov-report term --cov depscan" ""
-  '';
-
   build-system = with python3.pkgs; [ setuptools ];
 
   dependencies = with python3.pkgs; [
@@ -40,6 +35,7 @@ python3.pkgs.buildPythonApplication rec {
 
   nativeCheckInputs = with python3.pkgs; [
     httpretty
+    pytest-cov-stub
     pytestCheckHook
   ];
 

pkgs/by-name/ga/gato/package.nix

@@ -16,11 +16,6 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-vXQFgP0KDWo1VWe7tMGCB2yEYlr/1KMXsiNupBVLBqc=";
   };
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace "--cov=gato" ""
-  '';
-
   nativeBuildInputs = with python3.pkgs; [
     setuptools
     wheel
@@ -36,6 +31,7 @@ python3.pkgs.buildPythonApplication rec {
 
   nativeCheckInputs = with python3.pkgs; [
     git
+    pytest-cov-stub
     pytestCheckHook
   ];
 

pkgs/by-name/gi/git-pw/package.nix

@@ -20,11 +20,6 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-3IiFU6qGI2MDTBOLQ2qyT5keUMNTNG3sxhtGR3bkIBc=";
   };
 
-  postPatch = ''
-    # We don't want to run the coverage.
-    substituteInPlace tox.ini --replace "--cov=git_pw --cov-report" ""
-  '';
-
   nativeBuildInputs = with python3.pkgs; [
     pbr
     setuptools
@@ -39,6 +34,7 @@ python3.pkgs.buildPythonApplication rec {
   ];
 
   nativeCheckInputs = with python3.pkgs; [
+    pytest-cov-stub
     pytest
     git
   ];

pkgs/by-name/ma/makejinja/package.nix

@@ -31,12 +31,10 @@ python3Packages.buildPythonApplication rec {
     ++ typed-settings.optional-dependencies.cattrs
     ++ typed-settings.optional-dependencies.click;
 
-  preCheck = ''
-    substituteInPlace pyproject.toml \
-        --replace-fail "--cov makejinja --cov-report term-missing" ""
-  '';
-
-  nativeCheckInputs = with python3Packages; [ pytestCheckHook ];
+  nativeCheckInputs = with python3Packages; [
+    pytest-cov-stub
+    pytestCheckHook
+  ];
 
   meta = {
     description = "Generate entire directory structures using Jinja templates with support for external data and custom plugins";

pkgs/by-name/ma/marge-bot/package.nix

@@ -16,7 +16,7 @@ python3.pkgs.buildPythonApplication rec {
   };
 
   postPatch = ''
-    substituteInPlace setup.cfg --replace-fail "--flake8 --pylint --cov=marge" ""
+    substituteInPlace setup.cfg --replace-fail "--flake8 --pylint" ""
   '';
 
   nativeBuildInputs = [
@@ -30,12 +30,18 @@ python3.pkgs.buildPythonApplication rec {
     requests
   ];
 
-  nativeCheckInputs = with python3.pkgs; [ pytestCheckHook pendulum ];
+  nativeCheckInputs = with python3.pkgs; [
+    pytest-cov-stub
+    pytestCheckHook
+    pendulum
+  ];
+
   disabledTests = [
     # test broken when run under Nix:
     #   "unittest.mock.InvalidSpecError: Cannot spec a Mock object."
     "test_get_mr_ci_status"
   ];
+
   disabledTestPaths = [
     # test errors due to API mismatch in test setup:
     #   "ImportError: cannot import name 'set_test_now' from 'pendulum.helpers'"

pkgs/by-name/pr/pretalx/package.nix

@@ -74,9 +74,6 @@ python.pkgs.buildPythonApplication rec {
   postPatch = ''
     substituteInPlace src/pretalx/common/management/commands/rebuild.py \
       --replace 'subprocess.check_call(["npm", "run", "build"], cwd=frontend_dir, env=env)' ""
-
-    substituteInPlace src/setup.cfg \
-      --replace "--cov=./ --cov-report=" ""
   '';
 
   nativeBuildInputs = [
@@ -196,6 +193,7 @@ python.pkgs.buildPythonApplication rec {
     faker
     freezegun
     jsonschema
+    pytest-cov-stub
     pytest-django
     pytest-mock
     pytest-xdist

pkgs/by-name/sn/snapcraft/package.nix

@@ -88,8 +88,7 @@ python.pkgs.buildPythonApplication rec {
       'return str(Path("${glibc}/lib/ld-linux-x86-64.so.2"))'
 
     substituteInPlace pyproject.toml \
-      --replace-fail '"pytest-cov>=4.0",' "" \
-      --replace-fail "--cov=snapcraft" ""
+      --replace-fail '"pytest-cov>=4.0",' ""
   '';
 
   nativeBuildInputs = [ makeWrapper ];
@@ -155,6 +154,7 @@ python.pkgs.buildPythonApplication rec {
     with python.pkgs;
     [
       pytest-check
+      pytest-cov-stub
       pytest-mock
       pytest-subprocess
       pytestCheckHook

pkgs/by-name/su/sublime-music/package.nix

@@ -35,11 +35,6 @@ python3.pkgs.buildPythonApplication rec {
     })
   ];
 
-  postPatch = ''
-    sed -i "/--cov/d" setup.cfg
-    sed -i "/--no-cov-on-fail/d" setup.cfg
-  '';
-
   build-system = with python3.pkgs; [
     flit-core
   ];
@@ -76,6 +71,7 @@ python3.pkgs.buildPythonApplication rec {
   ;
 
   nativeCheckInputs = with python3.pkgs; [
+    pytest-cov-stub
     pytestCheckHook
   ];
 

pkgs/development/tools/codespell/default.nix

@@ -16,12 +16,6 @@ python3.pkgs.buildPythonApplication rec {
     sha256 = "sha256-X3Pueu0E7Q57sbKSXqCZki4/PUb1WyWk/Zmj+lhVTM8=";
   };
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace "--cov=codespell_lib" "" \
-      --replace "--cov-report=" ""
-  '';
-
   nativeBuildInputs = with python3.pkgs; [
     setuptools-scm
   ];
@@ -30,6 +24,7 @@ python3.pkgs.buildPythonApplication rec {
     aspell-python
     chardet
     pytestCheckHook
+    pytest-cov-stub
     pytest-dependency
   ];
 

pkgs/development/tools/refurb/default.nix

@@ -15,11 +15,6 @@ python3Packages.buildPythonApplication rec {
     hash = "sha256-6MchaqRKJPmvwiDyhCK4kFyIYl2B+2dGL8H8X2ES+VQ=";
   };
 
-  postPatch = ''
-    # remove --cov* options provided to pytest
-    sed -i '/^addopts = "--cov/d' pyproject.toml
-  '';
-
   nativeBuildInputs = with python3Packages; [
     poetry-core
   ];
@@ -43,6 +38,7 @@ python3Packages.buildPythonApplication rec {
     pluggy
     py
     pyparsing
+    pytest-cov-stub
     pytestCheckHook
   ];
 

pkgs/servers/home-assistant/custom-components/govee-lan/default.nix

@@ -3,6 +3,7 @@
 , fetchFromGitHub
 , fetchpatch2
 , govee-led-wez
+, pytest-cov-stub
 , pytest-homeassistant-custom-component
 , pytestCheckHook
 }:
@@ -26,11 +27,6 @@ buildHomeAssistantComponent {
     })
   ];
 
-  postPatch = ''
-    substituteInPlace setup.cfg \
-      --replace-fail "--cov=custom_components" ""
-  '';
-
   dontBuild = true;
 
   propagatedBuildInputs = [
@@ -41,11 +37,11 @@ buildHomeAssistantComponent {
   doCheck = false;
 
   nativeCheckInputs = [
+    pytest-cov-stub
     pytest-homeassistant-custom-component
     pytestCheckHook
   ];
 
-
   meta = with lib; {
     description = "Control Govee lights via the LAN API from Home Assistant";
     homepage = "https://github.com/wez/govee-lan-hass";

pkgs/servers/home-assistant/custom-components/mass/default.nix

@@ -6,6 +6,7 @@
 , music-assistant
 , pytestCheckHook
 , pytest-asyncio
+, pytest-cov-stub
 , pytest-homeassistant-custom-component
 }:
 
@@ -21,10 +22,6 @@ buildHomeAssistantComponent rec {
     hash = "sha256-Wvc+vUYkUJmS4U34Sh/sDCVXmQA0AtEqIT8MNXd++3M=";
   };
 
-  postPatch = ''
-    sed -i "s/--cov//" pyproject.toml
-  '';
-
   dependencies = [
     async-timeout
     (toPythonModule music-assistant)
@@ -35,6 +32,7 @@ buildHomeAssistantComponent rec {
   nativeCheckInputs = [
     pytestCheckHook
     pytest-asyncio
+    pytest-cov-stub
     pytest-homeassistant-custom-component
   ];
 

pkgs/tools/admin/ansible/later.nix

@@ -25,11 +25,6 @@ python3.pkgs.buildPythonApplication rec {
     })
   ];
 
-  postPatch = ''
-    substituteInPlace pyproject.toml \
-      --replace " --cov=ansiblelater --cov-report=xml:coverage.xml --cov-report=term --no-cov-on-fail" ""
-  '';
-
   pythonRelaxDeps = [
     "anyconfig"
     "flake8"
@@ -65,6 +60,7 @@ python3.pkgs.buildPythonApplication rec {
   ];
 
   nativeCheckInputs = with python3.pkgs; [
+    pytest-cov-stub
     pytest-mock
     pytestCheckHook
   ];

pkgs/tools/backup/zfs-replicate/default.nix

@@ -4,7 +4,7 @@
 , hypothesis
 , lib
 , poetry-core
-, pytest
+, pytest-cov-stub
 , pytestCheckHook
 , stringcase
 }:
@@ -19,10 +19,6 @@ buildPythonApplication rec {
     hash = "sha256-Xmg33bqs3gQJWqkCNiWYUem3o6XsxpfbHIVvLs/2D94=";
   };
 
-  postPatch = ''
-    sed -i pyproject.toml -e '/--cov[^"]*/d'
-  '';
-
   nativeBuildInputs = [
     poetry-core
   ];
@@ -30,7 +26,7 @@ buildPythonApplication rec {
   nativeCheckInputs = [
     pytestCheckHook
     hypothesis
-    pytest
+    pytest-cov-stub
   ];
 
   propagatedBuildInputs = [

pkgs/tools/misc/esphome/default.nix

@@ -48,9 +48,6 @@ python.pkgs.buildPythonApplication rec {
     substituteInPlace pyproject.toml \
       --replace-fail "setuptools==" "setuptools>="
 
-    # drop coverage testing
-    sed -i '/--cov/d' pyproject.toml
-
     # ensure component dependencies are available
     cat requirements_optional.txt >> requirements.txt
     # relax strict runtime version check
@@ -112,6 +109,7 @@ python.pkgs.buildPythonApplication rec {
     hypothesis
     mock
     pytest-asyncio
+    pytest-cov-stub
     pytest-mock
     pytestCheckHook
   ];

pkgs/tools/misc/kb/default.nix

@@ -22,11 +22,6 @@ python3.pkgs.buildPythonApplication rec {
       --replace \
         "install_requires=[\"colored\",\"toml\",\"attr\",\"attrs\",\"gitpython\"]," \
         "install_requires=[\"colored\",\"toml\",\"attrs\",\"gitpython\"],"
-
-    # pytest coverage reporting isn't necessary
-    substituteInPlace setup.cfg \
-      --replace \
-      "addopts = --cov=kb --cov-report term-missing" ""
   '';
 
   propagatedBuildInputs = with python3.pkgs; [
@@ -37,6 +32,7 @@ python3.pkgs.buildPythonApplication rec {
   ];
 
   nativeCheckInputs = with python3.pkgs; [
+    pytest-cov-stub
     pytestCheckHook
   ];
 

pkgs/tools/security/ioc-scan/default.nix

@@ -15,17 +15,13 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-SCyCANZfi7PqexM2Kc8WJwwEEiBQxPBg0ggWsK9WB4k=";
   };
 
-  postPatch = ''
-    substituteInPlace pytest.ini \
-      --replace-fail " --cov" ""
-  '';
-
   build-system = with python3.pkgs; [ setuptools ];
 
   propagatedBuildInputs = with python3.pkgs; [ docopt];
 
   nativeCheckInputs = with python3.pkgs; [
     pyfakefs
+    pytest-cov-stub
     pytestCheckHook
   ];
 

pkgs/tools/security/kube-hunter/default.nix

@@ -32,6 +32,7 @@ python3.pkgs.buildPythonApplication rec {
   ];
 
   nativeCheckInputs = with python3.pkgs; [
+    pytest-cov-stub
     pytestCheckHook
     requests-mock
   ];
@@ -39,8 +40,7 @@ python3.pkgs.buildPythonApplication rec {
   postPatch = ''
     substituteInPlace setup.cfg \
       --replace "dataclasses" "" \
-      --replace "kubernetes==12.0.1" "kubernetes" \
-      --replace "--cov=kube_hunter" ""
+      --replace "kubernetes==12.0.1" "kubernetes"
   '';
 
   pythonImportsCheck = [

pkgs/tools/security/sshuttle/default.nix

@@ -25,11 +25,6 @@ python3Packages.buildPythonApplication rec {
 
   patches = [ ./sudo.patch ];
 
-  postPatch = ''
-    substituteInPlace setup.cfg \
-      --replace '--cov=sshuttle --cov-branch --cov-report=term-missing' ""
-  '';
-
   nativeBuildInputs = [
     installShellFiles
     makeWrapper
@@ -37,7 +32,7 @@ python3Packages.buildPythonApplication rec {
     sphinx
   ];
 
-  nativeCheckInputs = with python3Packages; [ pytestCheckHook ];
+  nativeCheckInputs = with python3Packages; [ pytest-cov-stub pytestCheckHook ];
 
   postBuild = ''
     make man -C docs

pkgs/tools/security/trustymail/default.nix

@@ -16,11 +16,6 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-Zkw+NfeVtIArrBxR1qR9bAQe5yd7mAtNiT0x5Mqr3Ic=";
   };
 
-  postPatch = ''
-    substituteInPlace pytest.ini \
-      --replace-fail " --cov" ""
-  '';
-
   build-system = with python3.pkgs; [ setuptools ];
 
   dependencies =
@@ -35,7 +30,10 @@ python3.pkgs.buildPythonApplication rec {
     ]
     ++ publicsuffixlist.optional-dependencies.update;
 
-  nativeCheckInputs = with python3.pkgs; [ pytestCheckHook ];
+  nativeCheckInputs = with python3.pkgs; [
+    pytest-cov-stub
+    pytestCheckHook
+  ];
 
   pythonImportsCheck = [ "trustymail" ];
 

pkgs/tools/security/wapiti/default.nix

@@ -16,12 +16,6 @@ python3.pkgs.buildPythonApplication rec {
     hash = "sha256-Ekh31MXqxY6iSyQRX0YZ0Tl7DFhYqGtOepYS/VObZc0=";
   };
 
-  postPatch = ''
-    # Remove code coverage checking
-    substituteInPlace pyproject.toml \
-      --replace-fail "--cov --cov-report=xml" ""
-  '';
-
   pythonRelaxDeps = true;
 
   build-system = with python3.pkgs; [ setuptools ];
@@ -61,6 +55,7 @@ python3.pkgs.buildPythonApplication rec {
   nativeCheckInputs = with python3.pkgs; [
     respx
     pytest-asyncio
+    pytest-cov-stub
     pytestCheckHook
   ];